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  • Top cofit genes for ABI39_RS04855 from Phocaeicola dorei CL03T12C01

    glycoside hydrolase family 88 protein
    SEED: Rhamnogalacturonides degradation protein RhiN

    Rank Hit Name Description Conserved? Cofitness  
    1 ABI39_RS11185 DUF3408 domain-containing protein no 0.54
    2 ABI39_RS18510 RloB domain-containing protein no 0.52
    3 ABI39_RS21440 helix-turn-helix transcriptional regulator no 0.51
    4 ABI39_RS05750 non-canonical purine NTP diphosphatase no 0.51
    5 ABI39_RS00625 heparinase II/III family protein no 0.51
    6 ABI39_RS22480 MGMT family protein no 0.50
    7 ABI39_RS16075 hypothetical protein no 0.50
    8 ABI39_RS09270 AI-2E family transporter no 0.50
    9 ABI39_RS07690 hypothetical protein no 0.48
    10 ABI39_RS12930 MFS transporter no 0.48
    11 ABI39_RS18285 nicotinamide mononucleotide transporter no 0.47
    12 ABI39_RS00375 dihydrofolate reductase no 0.46
    13 ABI39_RS07615 NAD(P)-dependent alcohol dehydrogenase no 0.46
    14 ABI39_RS16135 site-specific integrase no 0.46
    15 ABI39_RS18630 IS21-like element helper ATPase IstB no 0.46
    16 ABI39_RS15255 hypothetical protein no 0.45
    17 ABI39_RS11725 hypothetical protein no 0.45
    18 ABI39_RS08710 DUF3945 domain-containing protein no 0.45
    19 ABI39_RS10720 calycin-like domain-containing protein no 0.44
    20 ABI39_RS01500 carboxypeptidase-like regulatory domain-containing protein no 0.44

    Or look for negative cofitness