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  • Top cofit genes for ABI39_RS03995 from Phocaeicola dorei CL03T12C01

    peroxiredoxin
    SEED: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
    KEGG: peroxiredoxin (alkyl hydroperoxide reductase subunit C)

    Rank Hit Name Description Conserved? Cofitness  
    1 ABI39_RS17190 universal stress protein no 0.41
    2 ABI39_RS15345 lysine exporter LysO family protein no 0.35
    3 ABI39_RS15330 excinuclease ABC subunit UvrA 0.52 0.35
    4 ABI39_RS12115 AraC family transcriptional regulator no 0.35
    5 ABI39_RS13220 PD-(D/E)XK nuclease domain-containing protein no 0.34
    6 ABI39_RS00440 excinuclease ABC subunit UvrA 0.30 0.34
    7 ABI39_RS01455 hypothetical protein no 0.34
    8 ABI39_RS10220 AhpC/TSA family protein no 0.34
    9 ABI39_RS14950 glycosyl transferase no 0.34
    10 ABI39_RS08365 phosphoribosylaminoimidazolecarboxamide formyltransferase no 0.34
    11 ABI39_RS13680 ABC transporter permease 0.66 0.33
    12 ABI39_RS01350 hypothetical protein no 0.33
    13 ABI39_RS18850 twin-arginine translocase TatA/TatE family subunit no 0.33
    14 ABI39_RS04195 Na/Pi cotransporter family protein no 0.33
    15 ABI39_RS18845 twin-arginine translocase subunit TatC 0.67 0.33
    16 ABI39_RS15300 excinuclease ABC subunit UvrB 0.78 0.33
    17 ABI39_RS08400 low specificity L-threonine aldolase 0.42 0.33
    18 ABI39_RS20130 glutamate decarboxylase 0.67 0.33
    19 ABI39_RS18015 efflux transporter outer membrane subunit no 0.33
    20 ABI39_RS20250 hypothetical protein no 0.32

    Or look for negative cofitness