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Cofit
Protein
Homologs
Top cofit genes for b4687 from
Escherichia coli BW25113
shoB
:
toxic membrane protein (RefSeq)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b2879
b2879
putative proteoglycan (VIMSS)
no
0.20
2
b4176
yjeT
conserved inner membrane protein (NCBI)
no
0.19
3
b0192
nlpE
lipoprotein involved with copper homeostasis and adhesion (NCBI)
no
0.18
4
b4544
yfbW
hypothetical protein (NCBI)
no
0.17
5
b4004
zraR
fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI)
no
0.17
6
b0557
borD
DLP12 prophage; predicted lipoprotein (NCBI)
no
0.17
7
b2996
hybA
hydrogenase 2 4Fe-4S ferredoxin-type component (NCBI)
no
0.17
8
b4653
yicT
no description
no
0.17
9
b2532
yfhQ
predicted methyltransferase (NCBI)
no
0.16
10
b1200
b1200
putative dihydroxyacetone kinase (EC 2.7.1.2) (VIMSS)
no
0.16
11
b1195
ymgE
predicted inner membrane protein (NCBI)
no
0.16
12
b2359
yfdP
CPS-53 (KpLE1) prophage; predicted protein (RefSeq)
no
0.15
13
b1392
paaE
predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI)
no
0.15
14
b1177
ycgJ
hypothetical protein (NCBI)
no
0.15
15
b3330
yheH
putative export protein for general secretion pathway (GSP) (VIMSS)
no
0.15
16
b4435
isrC
unknown RNA (NCBI)
no
0.14
17
b1908
yecA
conserved metal-binding protein (NCBI)
no
0.14
18
b1044
ymdA
hypothetical protein (NCBI)
no
0.14
19
b2552
hmp
fused nitric oxide dioxygenase/dihydropteridine reductase 2 (NCBI)
no
0.14
20
b3241
aaeA
p-hydroxybenzoic acid efflux system component (NCBI)
no
0.14
Or look for
negative cofitness