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  • Top cofit genes for b4644 from Escherichia coli BW25113

    ypjI: no description

    Rank Hit Name Description Conserved? Cofitness  
    1 b2945 endA DNA-specific endonuclease I (NCBI) no 0.22
    2 b1914 uvrY response regulator (NCBI) no 0.20
    3 b2794 yqcD hypothetical protein (NCBI) no 0.20
    4 b1685 ydiH predicted protein (RefSeq) no 0.18
    5 b0058 rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) no 0.18
    6 b0611 rna ribonuclease I (NCBI) no 0.18
    7 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) no 0.18
    8 b2617 smpA small membrane protein A (VIMSS) no 0.17
    9 b2494 yfgC predicted peptidase (NCBI) no 0.17
    10 b2060 b2060 orf, hypothetical protein (VIMSS) no 0.17
    11 b4135 yjdC orf, hypothetical protein (VIMSS) no 0.17
    12 b0565 ompT DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) (NCBI) no 0.17
    13 b3225 nanA N-acetylneuraminate lyase (NCBI) no 0.17
    14 b0053 surA peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) no 0.17
    15 b2006 yeeW CP4-44 prophage; predicted protein (RefSeq) no 0.17
    16 b4608 ryfC Novel sRNA, function unknown (RefSeq) no 0.17
    17 b2035 wbbH O-antigen polymerase (NCBI) no 0.16
    18 b1824 yobF hypothetical protein (NCBI) no 0.16
    19 b1311 ycjO predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) no 0.16
    20 b2630 yfjN CP4-57 prophage; RNase LS (NCBI) no 0.16

    Or look for negative cofitness