Top cofit genes for b4609 from Escherichia coli BW25113

ryfD: Novel sRNA, function unknown (RefSeq)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b1241	adhE	fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI)	no	0.28
2	b0611	rna	ribonuclease I (NCBI)	no	0.28
3	b2945	endA	DNA-specific endonuclease I (NCBI)	no	0.27
4	b3744	asnA	asparagine synthetase AsnA (NCBI)	no	0.25
5	b3784	rfe	UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI)	no	0.23
6	b3291	mscL	large-conductance mechanosensitive channel (NCBI)	no	0.23
7	b3927	glpF	glycerol facilitator (NCBI)	no	0.22
8	b0819	ybiS	hypothetical protein (NCBI)	no	0.22
9	b0903	pflB	pyruvate formate lyase I (NCBI)	no	0.22
10	b3248	yhdE	Maf-like protein (NCBI)	no	0.22
11	b0904	focA	formate transporter (NCBI)	no	0.22
12	b3787	rffD	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI)	no	0.22
13	b3497	yhiQ	predicted SAM-dependent methyltransferase (NCBI)	no	0.22
14	b2819	recD	exonuclease V (RecBCD complex), alpha chain (NCBI)	no	0.22
15	b3790	rffC	TDP-fucosamine acetyltransferase (RefSeq)	no	0.21
16	b3794	rffM	putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI)	no	0.20
17	b3261	fis	DNA-binding protein Fis (NCBI)	no	0.20
18	b3279	yrdA	putative transferase (VIMSS)	no	0.20
19	b3881	yihT	predicted aldolase (NCBI)	no	0.19
20	b0059	hepA	ATP-dependent helicase HepA (NCBI)	no	0.19

Or look for negative cofitness