Top cofit genes for b4606 from Escherichia coli BW25113

ypfM: hypothetical protein (RefSeq)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b0611	rna	ribonuclease I (NCBI)	no	0.28
2	b1488	ddpX	D-ala-D-ala dipeptidase, Zn-dependent (NCBI)	no	0.28
3	b2945	endA	DNA-specific endonuclease I (NCBI)	no	0.27
4	b4411	ecnB	entericidin B membrane lipoprotein (NCBI)	no	0.24
5	b1442	ydcU	predicted spermidine/putrescine transporter subunit (NCBI)	no	0.24
6	b0808	ybiO	putative transport protein (VIMSS)	no	0.24
7	b3675	yidG	predicted inner membrane protein (NCBI)	no	0.22
8	b0827	moeA	molybdopterin biosynthesis protein (NCBI)	no	0.22
9	b3744	asnA	asparagine synthetase AsnA (NCBI)	no	0.22
10	b1424	mdoD	glucan biosynthesis protein, periplasmic (RefSeq)	no	0.21
11	b1580	rspB	predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI)	no	0.21
12	b4310	yjhT	orf, hypothetical protein (VIMSS)	no	0.21
13	b3147	yraM	hypothetical protein (NCBI)	no	0.21
14	b0783	moaC	molybdenum cofactor biosynthesis protein C (NCBI)	no	0.21
15	b3787	rffD	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI)	no	0.21
16	b1589	ynfG	oxidoreductase, Fe-S subunit (NCBI)	no	0.21
17	b3387	dam	DNA adenine methylase (NCBI)	no	0.21
18	b0088	murD	UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI)	no	0.21
19	b2647	ypjA	putative ATP-binding component of a transport system (VIMSS)	no	0.20
20	b2819	recD	exonuclease V (RecBCD complex), alpha chain (NCBI)	no	0.20

Or look for negative cofitness