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Cofit
Top cofit genes for b4627 from
Escherichia coli BW25113
ykfL
: no description
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b1343
dbpA
ATP-dependent RNA helicase, specific for 23S rRNA (NCBI)
no
0.23
2
b1475
fdnH
formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible (NCBI)
no
0.22
3
b0161
degP
serine endoprotease (protease Do), membrane-associated (NCBI)
no
0.21
4
b0973
hyaB
hydrogenase 1, large subunit (NCBI)
no
0.21
5
b1358
ydaT
Rac prophage; predicted protein (NCBI)
no
0.20
6
b4402
yjjY
hypothetical protein (NCBI)
no
0.20
7
b1349
recT
Rac prophage; recombination and repair protein (NCBI)
no
0.20
8
b0065
yabI
conserved inner membrane protein (NCBI)
no
0.20
9
b2204
napH
quinol dehydrogenase membrane component (NCBI)
no
0.20
10
b2048
cpsG
phosphomannomutase (NCBI)
no
0.19
11
b3400
hslR
ribosome-associated heat shock protein Hsp15 (NCBI)
no
0.19
12
b0195
yaeB
hypothetical protein (NCBI)
no
0.19
13
b4478
dgoD
galactonate dehydratase (NCBI)
no
0.19
14
b2956
yggM
hypothetical protein (NCBI)
no
0.19
15
b2561
yfhH
orf, hypothetical protein (VIMSS)
no
0.19
16
b3940
metL
bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI)
no
0.18
17
b3998
nfi
endonuclease V (deoxyinosine 3'endoduclease) (VIMSS)
no
0.18
18
b1697
ydiQ
hypothetical protein (NCBI)
no
0.18
19
b0404
yajB
hypothetical protein (NCBI)
no
0.18
20
b2597
yfiA
cold shock protein associated with 30S ribosomal subunit (NCBI)
no
0.18
Or look for
negative cofitness