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Cofit
Top cofit genes for b3979 from
Escherichia coli BW25113
thrT
:
tRNA-Thr (NCBI)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b4375
prfC
peptide chain release factor 3 (NCBI)
no
0.35
2
b3613
yibP
putative membrane protein (VIMSS)
no
0.34
3
b2947
gshB
glutathione synthetase (NCBI)
no
0.33
4
b3816
corA
magnesium/nickel/cobalt transporter (NCBI)
no
0.33
5
b3867
hemN
O2-independent coproporphyrinogen III oxidase (VIMSS)
no
0.31
6
b1236
galU
glucose-1-phosphate uridylyltransferase (NCBI)
no
0.30
7
b2158
yeiH
conserved inner membrane protein (NCBI)
no
0.29
8
b3624
rfaZ
lipopolysaccharide core biosynthesis protein (NCBI)
no
0.29
9
b3183
obgE
GTPase involved in cell partioning and DNA repair (NCBI)
no
0.28
10
b3261
fis
DNA-binding protein Fis (NCBI)
no
0.28
11
b3977
tyrU
tRNA-Tyr (NCBI)
no
0.28
12
b2569
lepA
GTP-binding protein LepA (NCBI)
no
0.28
13
b4042
dgkA
diacylglycerol kinase (NCBI)
no
0.28
14
b2688
gshA
glutamate--cysteine ligase (NCBI)
no
0.28
15
b2699
recA
recombinase A (NCBI)
no
0.27
16
b3621
rfaC
ADP-heptose:LPS heptosyl transferase I (NCBI)
no
0.27
17
b4180
rlmB
23S rRNA (Gm2251)-methyltransferase (NCBI)
no
0.27
18
b4203
rplI
50S ribosomal protein L9 (NCBI)
no
0.27
19
b3500
gor
glutathione reductase (NCBI)
no
0.26
20
b2935
tktA
transketolase 1, thiamin-binding (NCBI)
no
0.26
Or look for
negative cofitness