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  • Top cofit genes for b3823 from Escherichia coli BW25113

    rhtC: threonine efflux system (NCBI)
    KEGG: threonine efflux protein

    Rank Hit Name Description Conserved? Cofitness  
    1 b2633 yfjQ CP4-57 prophage; predicted protein (NCBI) no 0.18
    2 b0283 yagQ hypothetical protein (NCBI) 0.43 0.16
    3 b1881 cheZ chemotaxis regulator, protein phosphatase for CheY (NCBI) no 0.15
    4 b3365 nirB nitrite reductase, large subunit, NAD(P)H-binding (NCBI) 0.15 0.15
    5 b0296 ykgM 50S ribosomal protein L31 (NCBI) no 0.15
    6 b0798 ybiA hypothetical protein (NCBI) no 0.15
    7 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) 0.48 0.15
    8 b0593 entC isochorismate synthase (NCBI) no 0.15
    9 b0813 rhtA threonine and homoserine efflux system (NCBI) no 0.14
    10 b1006 ycdG putative transport protein (VIMSS) no 0.14
    11 b1273 yciN hypothetical protein (NCBI) no 0.14
    12 b2147 yeiA putative oxidoreductase (VIMSS) 0.37 0.14
    13 b3337 bfd bacterioferritin-associated ferredoxin (NCBI) 0.71 0.14
    14 b2682 ygaZ predicted transporter (NCBI) 0.34 0.14
    15 b1484 ddpD D-ala-D-ala transporter subunit (NCBI) no 0.14
    16 b1308 pspE thiosulfate:cyanide sulfurtransferase (rhodanese) (NCBI) no 0.13
    17 b0251 yafY CP4-6 prophage; predicted DNA-binding transcriptional regulator (RefSeq) no 0.13
    18 b2951 yggS predicted enzyme (NCBI) no 0.13
    19 b4331 yjiI orf, hypothetical protein (VIMSS) 0.33 0.13
    20 b1225 narH nitrate reductase 1, beta (Fe-S) subunit (NCBI) no 0.13

    Or look for negative cofitness