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Cofit
Protein
Homologs
Top cofit genes for b4551 from
Escherichia coli BW25113
yheV
:
hypothetical protein (NCBI)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b0937
ssuE
NAD(P)H-dependent FMN reductase (NCBI)
no
0.24
2
b0069
sgrR
DNA-binding transcriptional regulator (NCBI)
no
0.24
3
b1567
intK
Qin prophage; predicted protein (RefSeq)
no
0.22
4
b2627
yfjK
CP4-57 prophage; conserved protein (NCBI)
no
0.21
5
b1370
insH-5
Rac prophage; IS5 transposase and trans-activator (NCBI)
no
0.21
6
b1548
nohA
Qin prophage; predicted packaging protein (RefSeq)
no
0.20
7
b0227
yafL
predicted lipoprotein and C40 family peptidase (NCBI)
no
0.20
8
b3887
dtd
D-tyrosyl-tRNA deacylase (NCBI)
no
0.20
9
b4340
yjiR
fused predicted DNA-binding transcriptional regulator/predicted aminotransferase (NCBI)
no
0.20
10
b0489
ybbK
predicted protease, membrane anchored (NCBI)
no
0.19
11
b0837
yliI
predicted dehydrogenase (NCBI)
no
0.19
12
b2357
yfdN
CPS-53 (KpLE1) prophage; predicted protein (NCBI)
no
0.19
13
b0260
ykfD
putative amino acid/amine transport protein (VIMSS)
no
0.19
14
b0850
ybjC
predicted inner membrane protein (NCBI)
0.49
0.19
15
b4210
ytfF
predicted inner membrane protein (RefSeq)
0.18
0.19
16
b2048
cpsG
phosphomannomutase (NCBI)
0.71
0.19
17
b0035
caiE
possible synthesis of cofactor for carnitine racemase and dehydratase (VIMSS)
no
0.18
18
b1310
ycjN
predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI)
0.45
0.18
19
b3909
kdgT
2-keto-3-deoxy-D-gluconate transport system (VIMSS)
no
0.18
20
b1768
ydjB
orf, hypothetical protein (VIMSS)
no
0.18
Or look for
negative cofitness