Top cofit genes for b4501 from Escherichia coli BW25113

torI: response regulator inhibitor for tor operon (NCBI)
SEED: Gene 18 protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b0554	essD	DLP12 prophage; predicted phage lysis protein (NCBI)	no	0.22
2	b4301	sgcE	ribulose-phosphate 3-epimerase (NCBI)	no	0.22
3	b4041	plsB	glycerol-3-phosphate acyltransferase (VIMSS)	no	0.20
4	b2356	yfdM	orf, hypothetical protein (VIMSS)	no	0.18
5	b3028	mdaB	NADPH quinone reductase (NCBI)	no	0.18
6	b2910	zapA	protein that localizes to the cytokinetic ring (NCBI)	no	0.17
7	b0551	ybcQ	DLP12 prophage; predicted antitermination protein (NCBI)	no	0.17
8	b1685	ydiH	predicted protein (RefSeq)	no	0.17
9	b2627	yfjK	CP4-57 prophage; conserved protein (NCBI)	no	0.17
10	b1279	yciS	conserved inner membrane protein (NCBI)	no	0.17
11	b2945	endA	DNA-specific endonuclease I (NCBI)	no	0.17
12	b4135	yjdC	orf, hypothetical protein (VIMSS)	no	0.17
13	b2767	ygcO	orf, hypothetical protein (VIMSS)	no	0.17
14	b2799	fucO	L-1,2-propanediol oxidoreductase (NCBI)	no	0.17
15	b4493	gapC	no description	no	0.17
16	b3265	acrE	cytoplasmic membrane lipoprotein (NCBI)	no	0.17
17	b0553	nmpC	DLP12 prophage; truncated outer membrane porin (pseudogene) (RefSeq)	no	0.16
18	b0611	rna	ribonuclease I (NCBI)	no	0.16
19	b3012	yqhE	orf, hypothetical protein (VIMSS)	no	0.16
20	b4297	yjhG	KpLE2 phage-like element; predicted dehydratase (NCBI)	no	0.16

Or look for negative cofitness