Top cofit genes for b1931 from Escherichia coli BW25113

yedK: hypothetical protein (NCBI)
SEED: Gifsy-2 prophage protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b1992	cobS	cobalamin synthase (NCBI)	0.14	0.18
2	b1123	potD	spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI)	no	0.17
3	b4041	plsB	glycerol-3-phosphate acyltransferase (VIMSS)	0.46	0.17
4	b0480	ushA	UDP-sugar hydrolase (NCBI)	0.33	0.16
5	b2136	yohD	orf, hypothetical protein (VIMSS)	0.50	0.15
6	b2385	ypdF	predicted peptidase (NCBI)	no	0.15
7	b1124	potC	spermidine/putrescine ABC transporter membrane protein (NCBI)	no	0.15
8	b0655	gltI	glutamate and aspartate transporter subunit (NCBI)	no	0.15
9	b4237	nrdG	anaerobic ribonucleotide reductase activating protein (NCBI)	no	0.14
10	b2100	yegV	predicted kinase (NCBI)	no	0.14
11	b0353	mhpT	putative transport protein (VIMSS)	0.15	0.14
12	b2542	hcaD	phenylpropionate dioxygenase, ferredoxin reductase subunit (NCBI)	no	0.14
13	b0896	dmsC	dimethyl sulfoxide reductase, anaerobic, subunit C (NCBI)	no	0.14
14	b4238	nrdD	anaerobic ribonucleoside triphosphate reductase (NCBI)	no	0.14
15	b1125	potB	spermidine/putrescine ABC transporter membrane protein (NCBI)	no	0.14
16	b1733	chbG	hypothetical protein (NCBI)	no	0.14
17	b0993	torS	sensor protein torS (regulator TorR) (VIMSS)	no	0.13
18	b4301	sgcE	ribulose-phosphate 3-epimerase (NCBI)	no	0.13
19	b0970	yccA	inner membrane protein (NCBI)	0.14	0.13
20	b1126	potA	putrescine/spermidine ABC transporter ATPase protein (NCBI)	no	0.13

Or look for negative cofitness