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Cofit
Top cofit genes for b1231 from
Escherichia coli BW25113
tyrT
:
tRNA-Tyr (NCBI)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b3744
asnA
asparagine synthetase AsnA (NCBI)
no
0.29
2
b2945
endA
DNA-specific endonuclease I (NCBI)
no
0.28
3
b0611
rna
ribonuclease I (NCBI)
no
0.27
4
b4613
dinQ
Damage inducible, function unknown (RefSeq)
no
0.24
5
b4521
ycgI
hypothetical protein (NCBI)
no
0.24
6
b3927
glpF
glycerol facilitator (NCBI)
no
0.23
7
b2819
recD
exonuclease V (RecBCD complex), alpha chain (NCBI)
no
0.23
8
b2071
yegJ
hypothetical protein (NCBI)
no
0.22
9
b2060
b2060
orf, hypothetical protein (VIMSS)
no
0.22
10
b2198
ccmD
cytochrome c biogenesis protein (NCBI)
no
0.21
11
b1685
ydiH
predicted protein (RefSeq)
no
0.21
12
b2911
ssrS
6S regulatory RNA (NCBI)
no
0.21
13
b4149
blc
outer membrane lipoprotein (lipocalin) (NCBI)
no
0.20
14
b1279
yciS
conserved inner membrane protein (NCBI)
no
0.20
15
b0379
yaiY
predicted inner membrane protein (NCBI)
no
0.20
16
b0837
yliI
predicted dehydrogenase (NCBI)
no
0.20
17
b3098
yqjD
hypothetical protein (NCBI)
no
0.20
18
b1526
yneJ
predicted DNA-binding transcriptional regulator (NCBI)
no
0.19
19
b2784
relA
(p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI)
no
0.19
20
b2318
truA
tRNA pseudouridine synthase A (NCBI)
no
0.19
Or look for
negative cofitness