Top cofit genes for b4506 from Escherichia coli BW25113

ykgO: rpmJ (L36) paralog (NCBI)
SEED: LSU ribosomal protein L36p
KEGG: large subunit ribosomal protein L36

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b4346	mcrB	component of McrBC 5-methylcytosine restriction system (VIMSS)	no	0.27
2	b3622	rfaL	O-antigen ligase (NCBI)	no	0.27
3	b3875	ompL	predicted outer membrane porin L (NCBI)	0.33	0.23
4	b3508	yhiD	predicted Mg(2+) transport ATPase inner membrane protein (NCBI)	no	0.23
5	b4311	yjhA	orf, hypothetical protein (VIMSS)	no	0.21
6	b4494	arpB	no description	no	0.21
7	b4651	yibW	no description	no	0.20
8	b3624	rfaZ	lipopolysaccharide core biosynthesis protein (NCBI)	no	0.20
9	b2071	yegJ	hypothetical protein (NCBI)	no	0.20
10	b1121	ycfZ	predicted inner membrane protein (NCBI)	no	0.20
11	b4600	ydfJ	no description	no	0.20
12	b0136	yadK	predicted fimbrial-like adhesin protein (NCBI)	no	0.20
13	b4660	yhiL	no description	no	0.20
14	b2371	yfdE	putative enzyme (VIMSS)	no	0.20
15	b1347	ydaC	Rac prophage; predicted protein (NCBI)	no	0.20
16	b4650	yibS	no description	no	0.19
17	b3623	rfaK	lipopolysaccharide core biosynthesis (NCBI)	no	0.19
18	b2652	ileY	tRNA-Ile (NCBI)	no	0.19
19	b1432	insQ	IS609 transposase B (RefSeq)	no	0.19
20	b1461	ydcE	4-oxalocrotonate tautomerase (NCBI)	no	0.18

Or look for negative cofitness