Top cofit genes for b4307 from Escherichia coli BW25113

yjhQ: KpLE2 phage-like element; predicted acetyltransferase (NCBI)
SEED: PhnO protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2000	flu	CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter (NCBI)	no	0.23
2	b0821	ybiU	hypothetical protein (NCBI)	no	0.19
3	b2289	lrhA	DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI)	0.59	0.19
4	b1384	feaR	DNA-binding transcriptional dual regulator (NCBI)	no	0.19
5	b0186	ldcC	lysine decarboxylase 2, constitutive (NCBI)	no	0.19
6	b0984	ymcA	hypothetical protein (NCBI)	no	0.18
7	b0152	fhuD	iron-hydroxamate transporter subunit (NCBI)	no	0.18
8	b0735	ybgE	conserved inner membrane protein (NCBI)	no	0.18
9	b3635	mutM	formamidopyrimidine-DNA glycosylase (NCBI)	no	0.18
10	b1390	paaC	predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI)	no	0.17
11	b1315	ycjS	predicted oxidoreductase, NADH-binding (NCBI)	no	0.17
12	b0192	nlpE	lipoprotein involved with copper homeostasis and adhesion (NCBI)	no	0.17
13	b3638	radC	DNA repair protein (VIMSS)	no	0.17
14	b1849	purT	phosphoribosylglycinamide formyltransferase 2 (NCBI)	no	0.17
15	b4397	creA	hypothetical protein (NCBI)	no	0.17
16	b1667	ydhR	hypothetical protein (NCBI)	no	0.16
17	b4371	rsmC	16S ribosomal RNA m2G1207 methyltransferase (NCBI)	no	0.16
18	b2335	yfcR	predicted fimbrial-like adhesin protein (NCBI)	no	0.16
19	b3898	frvX	predicted endo-1,4-beta-glucanase (NCBI)	no	0.16
20	b4306	yjhP	KpLE2 phage-like element; predicted methyltransferase (NCBI)	0.36	0.16

Or look for negative cofitness