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  • Top cofit genes for b4156 from Escherichia coli BW25113

    yjeM: putative transport (VIMSS)
    SEED: Putative amino acid permease

    Rank Hit Name Description Conserved? Cofitness  
    1 b3874 yihN predicted transporter (NCBI) no 0.45
    2 b0139 htrE predicted outer membrane usher protein (NCBI) no 0.44
    3 b4580 yaiT no description no 0.43
    4 b0833 yliE conserved inner membrane protein (NCBI) no 0.42
    5 b0511 ybbW putative transport protein (VIMSS) no 0.41
    6 b3659 setC predicted sugar efflux system (NCBI) no 0.41
    7 b4452 gadY unknown RNA (NCBI) no 0.41
    8 b4296 yjhF KpLE2 phage-like element; predicted transporter (NCBI) no 0.40
    9 b2863 ygeQ orf, hypothetical protein (VIMSS) no 0.40
    10 b3896 yiiG hypothetical protein (NCBI) no 0.39
    11 b0769 ybhH hypothetical protein (NCBI) 0.49 0.39
    12 b0138 yadM putative fimbrial-like protein (VIMSS) 0.41 0.39
    13 b3720 bglH carbohydrate-specific outer membrane porin, cryptic (NCBI) no 0.39
    14 b3873 yihM predicted sugar phosphate isomerase (NCBI) no 0.38
    15 b2548 yphF predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) no 0.38
    16 b3118 tdcA DNA-binding transcriptional activator (NCBI) no 0.38
    17 b0318 yahD predicted transcriptional regulator with ankyrin domain (NCBI) no 0.38
    18 b0834 yliF predicted diguanylate cyclase (NCBI) no 0.38
    19 b4310 yjhT orf, hypothetical protein (VIMSS) no 0.38
    20 b4116 adiY DNA-binding transcriptional activator (NCBI) no 0.38

    Or look for negative cofitness