Top cofit genes for b4058 from Escherichia coli BW25113

uvrA: excinuclease ABC subunit A (NCBI)
SEED: Excinuclease ABC subunit A
KEGG: excinuclease ABC subunit A

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b0779	uvrB	excinuclease ABC subunit B (NCBI)	0.99	0.93
2	b1913	uvrC	excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS)	0.99	0.84
3	b3700	recF	recombination protein F (NCBI)	0.90	0.78
4	b0472	recR	recombination protein RecR (NCBI)	0.94	0.76
5	b2565	recO	DNA repair protein RecO (NCBI)	0.95	0.75
6	b3813	uvrD	DNA-dependent ATPase I and helicase II (NCBI)	0.95	0.63
7	b1184	umuC	DNA polymerase V subunit UmuC (NCBI)	0.61	0.46
8	b3660	yicL	predicted inner membrane protein (NCBI)	0.62	0.46
9	b4389	radA	predicted repair protein (NCBI)	0.94	0.45
10	b1114	mfd	transcription-repair coupling factor (NCBI)	0.96	0.45
11	b0060	polB	DNA polymerase II (NCBI)	0.85	0.42
12	b2184	yejH	DNA damage response helicase (yejH or radD) (from data)	0.77	0.41
13	b0448	mdlA	fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI)	no	0.40
14	b2892	recJ	ssDNA exonuclease, 5' --> 3'-specific (NCBI)	0.82	0.39
15	b0449	mdlB	fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI)	0.66	0.39
16	b2616	recN	recombination and repair protein (NCBI)	0.92	0.39
17	b3822	recQ	ATP-dependent DNA helicase (NCBI)	0.80	0.37
18	b0577	ybdG	predicted mechanosensitive channel (NCBI)	no	0.37
19	b3651	trmH	tRNA (Guanosine-2'-O-)-methyltransferase (NCBI)	no	0.37
20	b3253	yhdH	predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI)	no	0.33

Or look for negative cofitness