Top cofit genes for b4039 from Escherichia coli BW25113

ubiC: chorismate lyase (VIMSS)
SEED: Chorismate--pyruvate lyase (EC 4.1.3.40)
KEGG: chorismate--pyruvate lyase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2260	menE	O-succinylbenzoic acid--CoA ligase (NCBI)	no	0.31
2	b2264	menD	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI)	no	0.30
3	b0785	moaE	molybdopterin synthase, large subunit (NCBI)	0.40	0.29
4	b0827	moeA	molybdopterin biosynthesis protein (NCBI)	0.42	0.28
5	b2729	hypD	protein required for maturation of hydrogenases (NCBI)	no	0.28
6	b3839	tatC	TatABCE protein translocation system subunit (NCBI)	0.78	0.27
7	b3479	nikD	nickel transporter subunit (NCBI)	no	0.27
8	b3792	wzxE	O-antigen translocase (NCBI)	0.77	0.27
9	b2996	hybA	hydrogenase 2 4Fe-4S ferredoxin-type component (NCBI)	0.70	0.27
10	b4481	rffT	4-alpha-L-fucosyltransferase (NCBI)	0.83	0.26
11	b3838	tatB	sec-independent translocase (NCBI)	no	0.25
12	b0783	moaC	molybdenum cofactor biosynthesis protein C (NCBI)	0.82	0.25
13	b3477	nikB	nickel transporter subunit (NCBI)	no	0.25
14	b0902	pflA	pyruvate formate lyase activating enzyme 1 (NCBI)	no	0.25
15	b1424	mdoD	glucan biosynthesis protein, periplasmic (RefSeq)	0.87	0.25
16	b0741	pal	peptidoglycan-associated outer membrane lipoprotein (NCBI)	no	0.24
17	b1963	b1963	orf, hypothetical protein (VIMSS)	no	0.24
18	b3791	rffA	TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI)	0.82	0.24
19	b4232	fbp	fructose-1,6-bisphosphatase (NCBI)	no	0.24
20	b3476	nikA	nickel transporter subunit (NCBI)	no	0.24

Or look for negative cofitness