Top cofit genes for b3962 from Escherichia coli BW25113

udhA: putative oxidoreductase (VIMSS)
SEED: Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)
KEGG: NAD(P) transhydrogenase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b1084	rne	fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI)	no	0.47
2	b1129	phoQ	sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI)	0.81	0.47
3	b1130	phoP	DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI)	0.83	0.46
4	b3726	pstA	phosphate transporter subunit (NCBI)	0.35	0.46
5	b0118	acnB	aconitate hydratase (NCBI)	0.81	0.46
6	b3212	gltB	glutamate synthase, large subunit (NCBI)	no	0.45
7	b3728	pstS	phosphate transporter subunit (NCBI)	0.37	0.45
8	b3213	gltD	glutamate synthase, 4Fe-4S protein, small subunit (NCBI)	no	0.44
9	b2320	pdxB	erythronate-4-phosphate dehydrogenase (NCBI)	0.73	0.43
10	b0437	clpP	ATP-dependent Clp protease proteolytic subunit (NCBI)	0.79	0.42
11	b3469	zntA	zinc, cobalt and lead efflux system (NCBI)	0.58	0.42
12	b2564	pdxJ	pyridoxal phosphate biosynthetic protein (NCBI)	0.34	0.41
13	b0052	pdxA	4-hydroxythreonine-4-phosphate dehydrogenase (NCBI)	no	0.41
14	b4242	mgtA	magnesium transporter (NCBI)	0.52	0.40
15	b3236	mdh	malate dehydrogenase (NCBI)	0.88	0.40
16	b3483	yhhH	orf, hypothetical protein (VIMSS)	no	0.40
17	b3725	pstB	phosphate transporter subunit (NCBI)	0.45	0.39
18	b3844	fre	NAD(P)H-flavin reductase (NCBI)	0.84	0.39
19	b0724	sdhB	succinate dehydrogenase, FeS subunit (NCBI)	0.83	0.39
20	b1235	rssB	response regulator of RpoS (NCBI)	no	0.39

Or look for negative cofitness