Top cofit genes for b3753 from Escherichia coli BW25113

rbsR: DNA-binding transcriptional repressor of ribose metabolism (NCBI)
SEED: Ribose operon repressor
KEGG: LacI family transcriptional regulator

Rank Hit Name Description Conserved? Cofitness  
1 b3752 rbsK ribokinase (NCBI) 0.99 0.76
2 b4450 arcZ sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) no 0.74
3 b0240 crl DNA-binding transcriptional regulator (NCBI) 0.90 0.74
4 b0382 yaiB hypothetical protein (NCBI) 0.40 0.71
5 b2741 rpoS RNA polymerase sigma factor (NCBI) 0.95 0.65
6 b1824 yobF hypothetical protein (NCBI) 0.41 0.65
7 b1725 yniA predicted phosphotransferase/kinase (NCBI) 0.52 0.64
8 b3929 rraA ribonuclease activity regulator protein RraA (NCBI) no 0.61
9 b1823 cspC stress protein, member of the CspA-family (NCBI) 0.78 0.56
10 b4071 nrfB formate-dependent nitrite reductase; a penta-haeme cytochrome c (VIMSS) no 0.56
11 b1916 sdiA DNA-binding transcriptional activator (NCBI) 0.89 0.51
12 b1422 ydcI putative transcriptional regulator LYSR-type (VIMSS) 0.56 0.50
13 b3229 sspA stringent starvation protein A (NCBI) 0.82 0.49
14 b1085 b1085 orf, hypothetical protein (VIMSS) no 0.49
15 b1822 rrmA 23S rRNA m1G745 methyltransferase (NCBI) 0.56 0.49
16 b2004 yeeU CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI) no 0.49
17 b1191 b1191 orf, hypothetical protein (VIMSS) 0.47 0.48
18 b4172 hfq RNA-binding protein Hfq (NCBI) 0.85 0.48
19 b1954 dsrA regulatory antisense RNA (NCBI) no 0.48
20 b1037 csgG outer membrane lipoprotein (NCBI) no 0.47

Or look for negative cofitness