Top cofit genes for b3645 from Escherichia coli BW25113

dinD: DNA-damage-inducible protein (VIMSS)
SEED: DNA-damage-inducible protein D
KEGG: DNA-damage-inducible protein D

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b3220	yhcG	hypothetical protein (NCBI)	no	0.28
2	b1062	pyrC	dihydroorotase (NCBI)	no	0.27
3	b3642	pyrE	orotate phosphoribosyltransferase (NCBI)	no	0.26
4	b0945	pyrD	dihydroorotate dehydrogenase (NCBI)	no	0.26
5	b4006	purH	bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI)	no	0.26
6	b2557	purL	phosphoribosylformylglycinamidine synthase (NCBI)	no	0.26
7	b2499	purM	phosphoribosylaminoimidazole synthetase (NCBI)	no	0.25
8	b1281	pyrF	orotidine 5'-phosphate decarboxylase (NCBI)	no	0.25
9	b1177	ycgJ	hypothetical protein (NCBI)	0.36	0.25
10	b2476	purC	phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI)	no	0.25
11	b0523	purE	phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI)	no	0.25
12	b4308	yjhR	KpLE2 phage-like element; predicted frameshift suppressor (NCBI)	no	0.25
13	b4005	purD	phosphoribosylamine--glycine ligase (NCBI)	no	0.25
14	b0522	purK	phosphoribosylaminoimidazole carboxylase (NCBI)	0.22	0.25
15	b1151	ymfO	e14 prophage; conserved protein (RefSeq)	no	0.24
16	b3281	aroE	dehydroshikimate reductase, NAD(P)-binding (NCBI)	no	0.24
17	b2152	yeiB	conserved inner membrane protein (NCBI)	no	0.24
18	b0145	dksA	DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI)	no	0.24
19	b2312	purF	amidophosphoribosyltransferase (NCBI)	no	0.24
20	b0033	carB	carbamoyl-phosphate synthase large subunit (NCBI)	no	0.24

Or look for negative cofitness