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  • Top cofit genes for b3568 from Escherichia coli BW25113

    xylH: D-xylose transporter subunit (NCBI)
    SEED: Xylose ABC transporter, permease protein XylH
    KEGG: D-xylose transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 b3691 dgoT D-galactonate transport (VIMSS) 0.57 0.21
    2 b1522 yneF predicted diguanylate cyclase (NCBI) no 0.20
    3 b4582 yoeA no description no 0.20
    4 b0872 hcr HCP oxidoreductase, NADH-dependent (NCBI) 0.33 0.20
    5 b1360 ydaV Rac prophage; predicted DNA replication protein (NCBI) no 0.19
    6 b2302 yfcG predicted glutathione S-transferase (NCBI) 0.43 0.19
    7 b2940 yqgC hypothetical protein (NCBI) no 0.18
    8 b0155 clcA chloride channel protein (NCBI) no 0.18
    9 b0238 gpt xanthine phosphoribosyltransferase (NCBI) 0.59 0.18
    10 b4566 yjhX hypothetical protein (NCBI) no 0.17
    11 b2451 eutA reactivating factor for ethanolamine ammonia lyase (NCBI) no 0.17
    12 b0186 ldcC lysine decarboxylase 2, constitutive (NCBI) no 0.17
    13 b0825 mipB putative transaldolase (VIMSS) 0.34 0.17
    14 b1683 ynhE orf, hypothetical protein (VIMSS) no 0.17
    15 b1035 ycdY hypothetical protein (NCBI) 0.31 0.17
    16 b3830 ysgA predicted hydrolase (NCBI) no 0.17
    17 b1321 ycjX conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.38 0.17
    18 b4393 trpR Trp operon repressor (NCBI) no 0.16
    19 b1657 ydhP predicted transporter (NCBI) 0.34 0.16
    20 b2458 eutI predicted phosphotransacetylase subunit (NCBI) no 0.16

    Or look for negative cofitness