Top cofit genes for b3565 from Escherichia coli BW25113

xylA: xylose isomerase (NCBI)
SEED: Xylose isomerase (EC 5.3.1.5)
KEGG: xylose isomerase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b3564	xylB	xylulokinase (NCBI)	0.98	0.79
2	b3569	xylR	DNA-binding transcriptional activator, xylose-binding (NCBI)	0.95	0.69
3	b3566	xylF	D-xylose transporter subunit (NCBI)	0.91	0.63
4	b3567	xylG	fused D-xylose transporter subunits of ABC superfamily: ATP-binding components (NCBI)	0.92	0.59
5	b4031	xylE	D-xylose transporter (NCBI)	0.96	0.24
6	b3387	dam	DNA adenine methylase (NCBI)	no	0.19
7	b3355	prkB	predicted phosphoribulokinase (NCBI)	no	0.19
8	b3670	ilvN	acetolactate synthase small subunit (NCBI)	no	0.18
9	b4310	yjhT	orf, hypothetical protein (VIMSS)	no	0.16
10	b3562	yiaA	orf, hypothetical protein (VIMSS)	0.27	0.16
11	b2421	cysM	cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI)	no	0.16
12	b1038	csgF	predicted transport protein (NCBI)	no	0.16
13	b2189	proL	tRNA-Pro (NCBI)	no	0.16
14	b4114	yjdB	orf, hypothetical protein (VIMSS)	no	0.15
15	b3675	yidG	predicted inner membrane protein (NCBI)	no	0.15
16	b4240	treB	fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI)	no	0.15
17	b3558	insK	IS150 conserved protein InsB (NCBI)	no	0.15
18	b4260	pepA	leucyl aminopeptidase (NCBI)	0.72	0.15
19	b3888	yiiD	predicted acetyltransferase (NCBI)	no	0.15
20	b0688	pgm	phosphoglucomutase (NCBI)	no	0.14

Or look for negative cofitness