Top cofit genes for b3554 from Escherichia coli BW25113

yiaF: orf, hypothetical protein (VIMSS)
SEED: probable exported protein YPO4070

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b3687	ibpA	heat shock chaperone (NCBI)	no	0.50
2	b3017	sufI	repressor protein for FtsI (NCBI)	0.69	0.48
3	b2435	amiA	N-acetylmuramoyl-l-alanine amidase I (NCBI)	no	0.46
4	b2893	dsbC	protein disulfide isomerase II (NCBI)	0.24	0.44
5	b3963	fabR	DNA-binding transcriptional repressor (RefSeq)	0.55	0.41
6	b3196	yrbG	predicted calcium/sodium:proton antiporter (NCBI)	no	0.38
7	b3740	gidB	glucose-inhibited division protein B (NCBI)	0.31	0.35
8	b2494	yfgC	predicted peptidase (NCBI)	0.69	0.35
9	b3031	yqiA	predicted esterase (NCBI)	0.31	0.34
10	b0140	ecpD	predicted periplasmic pilin chaperone (NCBI)	no	0.34
11	b4509	ylcG	DLP12 prophage; predicted protein (NCBI)	no	0.34
12	b2617	smpA	small membrane protein A (VIMSS)	0.58	0.33
13	b3928	yiiU	hypothetical protein (NCBI)	no	0.33
14	b2910	zapA	protein that localizes to the cytokinetic ring (NCBI)	no	0.33
15	b2477	nlpB	lipoprotein-34 (VIMSS)	0.65	0.33
16	b0847	ybjL	hypothetical protein (NCBI)	0.23	0.32
17	b4472	yhdP	conserved membrane protein, predicted transporter (NCBI)	0.50	0.31
18	b0939	ycbR	predicted periplasmic pilin chaperone (NCBI)	no	0.31
19	b0547	ybcN	DLP12 prophage; predicted protein (NCBI)	0.33	0.30
20	b3686	ibpB	heat shock chaperone (NCBI)	no	0.30

Or look for negative cofitness