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  • Top cofit genes for b3537 from Escherichia coli BW25113

    yhjT: orf, hypothetical protein (VIMSS)
    SEED: FIG005119: putative inner membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 b1648 b1648 orf, hypothetical protein (VIMSS) no 0.22
    2 b2945 endA DNA-specific endonuclease I (NCBI) no 0.22
    3 b2000 flu CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter (NCBI) no 0.22
    4 b3144 yraJ predicted outer membrane protein (NCBI) 0.31 0.22
    5 b0611 rna ribonuclease I (NCBI) no 0.21
    6 b3394 yrfC predicted fimbrial assembly protein (NCBI) no 0.21
    7 b1673 ydhV predicted oxidoreductase (NCBI) no 0.20
    8 b0486 ybaT predicted transporter (NCBI) no 0.20
    9 b4486 yjiV conserved protein (pseudogene) (RefSeq) no 0.20
    10 b2787 gudD (D)-glucarate dehydratase 1 (NCBI) no 0.19
    11 b2886 ygfS putative oxidoreductase, Fe-S subunit (VIMSS) no 0.19
    12 b4696 yneO no description no 0.19
    13 b2342 yfcY acetyl-CoA acetyltransferase (NCBI) no 0.19
    14 b0228 yafM hypothetical protein (NCBI) no 0.19
    15 b3253 yhdH predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) no 0.19
    16 b3885 yihX putative phosphatase (VIMSS) 0.24 0.18
    17 b0352 mhpE 4-hydroxy-2-ketovalerate aldolase (NCBI) no 0.18
    18 b1619 hdhA 7-alpha-hydroxysteroid dehydrogenase (NCBI) no 0.18
    19 b1334 fnr DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) no 0.18
    20 b3028 mdaB NADPH quinone reductase (NCBI) no 0.18

    Or look for negative cofitness