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  • Top cofit genes for b3472 from Escherichia coli BW25113

    b3472: orf, hypothetical protein (VIMSS)
    SEED: DcrB protein precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 b0633 rlpA minor lipoprotein (NCBI) no 0.42
    2 b3791 rffA TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) 0.48 0.40
    3 b3790 rffC TDP-fucosamine acetyltransferase (RefSeq) 0.40 0.38
    4 b4481 rffT 4-alpha-L-fucosyltransferase (NCBI) 0.38 0.38
    5 b0149 mrcB penicillin-binding protein 1b (NCBI) 0.69 0.38
    6 b3529 yhjK predicted diguanylate cyclase (RefSeq) 0.27 0.37
    7 b3787 rffD UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) 0.30 0.36
    8 b2516 yfgA hypothetical protein (NCBI) no 0.35
    9 b0632 dacA D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) 0.61 0.34
    10 b3388 damX hypothetical protein (NCBI) 0.39 0.33
    11 b3150 yraP hypothetical protein (NCBI) no 0.33
    12 b3794 rffM putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) 0.35 0.33
    13 b3609 secB export protein SecB (NCBI) no 0.32
    14 b2175 spr predicted peptidase, outer membrane lipoprotein (NCBI) 0.31 0.32
    15 b3655 yicH hypothetical protein (NCBI) no 0.30
    16 b0742 ybgF hypothetical protein (NCBI) no 0.30
    17 b0092 ddlB D-alanylalanine synthetase (NCBI) 0.54 0.29
    18 b1097 yceG predicted aminodeoxychorismate lyase (NCBI) 0.45 0.29
    19 b3792 wzxE O-antigen translocase (NCBI) 0.46 0.28
    20 b0434 yajG putative polymerase/proteinase (VIMSS) no 0.28

    Or look for negative cofitness