Top cofit genes for b3439 from Escherichia coli BW25113

yhhW: hypothetical protein (NCBI)
SEED: Qercetin 2,3-dioxygenase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b3666	uhpT	sugar phosphate antiporter (NCBI)	0.57	0.16
2	b3781	trxA	thioredoxin 1 (VIMSS)	no	0.16
3	b3653	gltS	glutamate transporter (NCBI)	0.44	0.16
4	b1141	ymfG	e14 prophage; predicted excisionase (NCBI)	no	0.16
5	b3894	fdoG	formate dehydrogenase-O, large subunit (NCBI)	no	0.15
6	b1760	ynjH	hypothetical protein (NCBI)	no	0.15
7	b4129	lysU	lysine tRNA synthetase, inducible (NCBI)	no	0.15
8	b0467	priC	primosomal replication protein N'' (NCBI)	0.43	0.15
9	b2157	yeiE	predicted DNA-binding transcriptional regulator (NCBI)	0.40	0.15
10	b3513	mdtE	multidrug resistance efflux transporter (NCBI)	no	0.15
11	b3003	yghA	oxidoreductase (NCBI)	0.42	0.15
12	b2050	wcaI	predicted glycosyl transferase (NCBI)	0.28	0.14
13	b0263	afuB	CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq)	no	0.14
14	b4493	gapC	no description	no	0.14
15	b3089	sstT	sodium:serine/threonine symporter (NCBI)	no	0.14
16	b3141	agaI	galactosamine-6-phosphate isomerase (NCBI)	no	0.14
17	b1252	tonB	membrane spanning protein in TonB-ExbB-ExbD complex (NCBI)	0.42	0.14
18	b0949	uup	fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI)	0.22	0.14
19	b0755	gpmA	phosphoglyceromutase (NCBI)	no	0.14
20	b1836	yebV	orf, hypothetical protein (VIMSS)	no	0.13

Or look for negative cofitness