Top cofit genes for b3434 from Escherichia coli BW25113

yhgN: predicted antibiotic transporter (NCBI)
SEED: Multiple antibiotic resistance protein marC

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b4079	fdhF	formate dehydrogenase-H, selenopolypeptide subunit (NCBI)	0.50	0.22
2	b0469	apt	adenine phosphoribosyltransferase (NCBI)	no	0.20
3	b2542	hcaD	phenylpropionate dioxygenase, ferredoxin reductase subunit (NCBI)	0.65	0.17
4	b0792	ybhR	predicted transporter subunit: membrane component of ABC superfamily (NCBI)	0.52	0.17
5	b2419	yfeK	hypothetical protein (NCBI)	no	0.17
6	b2959	yggL	orf, hypothetical protein (VIMSS)	0.22	0.17
7	b3362	yhfG	hypothetical protein (NCBI)	no	0.16
8	b2157	yeiE	predicted DNA-binding transcriptional regulator (NCBI)	no	0.16
9	b1188	ycgB	ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data)	no	0.16
10	b4094	phnN	ribose 1,5-bisphosphokinase (NCBI)	no	0.16
11	b0261	mmuM	homocysteine methyltransferase (NCBI)	no	0.16
12	b0284	yagR	predicted oxidoreductase with molybdenum-binding domain (NCBI)	0.57	0.15
13	b0593	entC	isochorismate synthase (NCBI)	no	0.15
14	b0433	ampG	muropeptide transporter (NCBI)	0.60	0.15
15	b1127	pepT	peptidase T (NCBI)	0.56	0.15
16	b2474	ypfI	predicted hydrolase (NCBI)	no	0.15
17	b2534	yfhR	predicted peptidase (RefSeq)	no	0.15
18	b4355	tsr	methyl-accepting chemotaxis protein I, serine sensor receptor (NCBI)	0.27	0.15
19	b2552	hmp	fused nitric oxide dioxygenase/dihydropteridine reductase 2 (NCBI)	no	0.15
20	b4097	phnK	carbon-phosphorus lyase complex subunit (NCBI)	no	0.15

Or look for negative cofitness