Top cofit genes for b3431 from Escherichia coli BW25113

glgX: glycogen debranching enzyme (NCBI)
SEED: Glycogen debranching enzyme (EC 3.2.1.-)
KEGG: glycogen operon protein GlgX

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2144	sanA	hypothetical protein (NCBI)	0.18	0.32
2	b3920	yiiQ	hypothetical protein (NCBI)	no	0.25
3	b3417	malP	maltodextrin phosphorylase (NCBI)	0.46	0.25
4	b2611	ypjD	predicted inner membrane protein (RefSeq)	0.58	0.24
5	b0632	dacA	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI)	0.18	0.24
6	b4206	ytfB	orf, hypothetical protein (VIMSS)	no	0.23
7	b3428	glgP	glycogen phosphorylase (NCBI)	0.84	0.23
8	b2564	pdxJ	pyridoxal phosphate biosynthetic protein (NCBI)	0.39	0.22
9	b0052	pdxA	4-hydroxythreonine-4-phosphate dehydrogenase (NCBI)	no	0.21
10	b3527	yhjJ	predicted zinc-dependent peptidase (NCBI)	no	0.21
11	b4169	amiB	N-acetylmuramoyl-l-alanine amidase II (NCBI)	no	0.21
12	b1084	rne	fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI)	no	0.21
13	b2320	pdxB	erythronate-4-phosphate dehydrogenase (NCBI)	no	0.21
14	b0926	ycbK	hypothetical protein (NCBI)	0.45	0.20
15	b3407	yhgF	orf, hypothetical protein (VIMSS)	no	0.20
16	b4024	lysC	aspartate kinase III (NCBI)	0.18	0.20
17	b0438	clpX	ATP-dependent protease ATP-binding subunit (NCBI)	0.28	0.20
18	b0437	clpP	ATP-dependent Clp protease proteolytic subunit (NCBI)	0.41	0.19
19	b2669	stpA	DNA binding protein, nucleoid-associated (NCBI)	no	0.19
20	b2188	yejM	predicted hydrolase, inner membrane (NCBI)	no	0.19

Or look for negative cofitness