Top cofit genes for b3252 from Escherichia coli BW25113

yhdA: conserved inner membrane protein (NCBI)
SEED: RNase E specificity factor CsrD

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b0007	yaaJ	predicted transporter (NCBI)	0.96	0.57
2	b0002	thrA	bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI)	0.43	0.57
3	b0003	thrB	homoserine kinase (NCBI)	0.45	0.57
4	b3960	argH	argininosuccinate lyase (NCBI)	0.45	0.57
5	b3172	argG	argininosuccinate synthase (NCBI)	0.45	0.57
6	b4388	serB	3-phosphoserine phosphatase (NCBI)	0.43	0.56
7	b0720	gltA	citrate synthase (NCBI)	0.74	0.56
8	b2329	aroC	chorismate synthase (NCBI)	0.65	0.56
9	b0908	aroA	3-phosphoshikimate 1-carboxyvinyltransferase (NCBI)	0.67	0.56
10	b0004	thrC	threonine synthase (NCBI)	0.45	0.56
11	b0907	serC	phosphoserine aminotransferase (NCBI)	0.46	0.55
12	b2913	serA	D-3-phosphoglycerate dehydrogenase (NCBI)	0.46	0.55
13	b2838	lysA	diaminopimelate decarboxylase, PLP-binding (NCBI)	0.46	0.54
14	b3281	aroE	dehydroshikimate reductase, NAD(P)-binding (NCBI)	0.90	0.54
15	b3389	aroB	3-dehydroquinate synthase (NCBI)	0.92	0.54
16	b3870	glnA	glutamine synthetase (NCBI)	0.90	0.54
17	b3956	ppc	phosphoenolpyruvate carboxylase (NCBI)	0.42	0.54
18	b2763	cysI	sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI)	0.41	0.53
19	b2764	cysJ	sulfite reductase, alpha subunit, flavoprotein (NCBI)	0.39	0.53
20	b2839	lysR	DNA-binding transcriptional dual regulator (NCBI)	0.59	0.53

Or look for negative cofitness