Top cofit genes for b3225 from Escherichia coli BW25113

nanA: N-acetylneuraminate lyase (NCBI)
SEED: N-acetylneuraminate lyase (EC 4.1.3.3)
KEGG: N-acetylneuraminate lyase

Rank Hit Name Description Conserved? Cofitness  
1 b3226 yhcK putative FADA-type transcriptional regulator (VIMSS) no 0.31
2 b0441 ppiD peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) no 0.27
3 b1175 minD membrane ATPase of the MinC-MinD-MinE system (NCBI) no 0.26
4 b2910 zapA protein that localizes to the cytokinetic ring (NCBI) no 0.25
5 b3872 yihL predicted DNA-binding transcriptional regulator (NCBI) no 0.25
6 b3881 yihT predicted aldolase (NCBI) no 0.25
7 b3075 ebgR DNA-binding transcriptional repressor (NCBI) no 0.24
8 b2952 yggT predicted inner membrane protein (NCBI) no 0.24
9 b4241 treR trehalose repressor (NCBI) no 0.23
10 b2158 yeiH conserved inner membrane protein (NCBI) no 0.23
11 b3816 corA magnesium/nickel/cobalt transporter (NCBI) no 0.23
12 b3932 hslV ATP-dependent protease peptidase subunit (NCBI) 0.48 0.23
13 b3466 yhhL conserved inner membrane protein (NCBI) no 0.22
14 b3891 fdhE formate dehydrogenase accessory protein FdhE (NCBI) no 0.22
15 b2004 yeeU CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI) no 0.22
16 b0140 ecpD predicted periplasmic pilin chaperone (NCBI) no 0.22
17 b3879 yihR putative aldose-1-epimerase (EC 5.1.3.3) (VIMSS) no 0.22
18 b1422 ydcI putative transcriptional regulator LYSR-type (VIMSS) no 0.22
19 b2513 yfgM hypothetical protein (NCBI) 0.36 0.22
20 b0407 yajC preprotein translocase subunit YajC (NCBI) no 0.21

Or look for negative cofitness