Top cofit genes for b3098 from Escherichia coli BW25113

yqjD: hypothetical protein (NCBI)
SEED: Uncharacterized membrane protein YqjD

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b0030	rihC	ribonucleoside hydrolase 3 (NCBI)	0.30	0.20
2	b3744	asnA	asparagine synthetase AsnA (NCBI)	0.25	0.20
3	b2126	yehU	predicted sensory kinase in two-component system with YehT (NCBI)	no	0.20
4	b0231	dinB	DNA polymerase IV (NCBI)	no	0.19
5	b1310	ycjN	predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI)	0.39	0.19
6	b3727	pstC	phosphate transporter subunit (NCBI)	no	0.19
7	b3462	ftsX	predicted transporter subunit: membrane component of ABC superfamily (NCBI)	0.38	0.18
8	b0133	panC	pantoate--beta-alanine ligase (NCBI)	0.13	0.18
9	b1670	ydhU	predicted cytochrome (NCBI)	no	0.18
10	b2060	b2060	orf, hypothetical protein (VIMSS)	0.31	0.18
11	b3407	yhgF	orf, hypothetical protein (VIMSS)	0.53	0.18
12	b3035	tolC	outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS)	no	0.18
13	b4328	iadA	isoaspartyl dipeptidase (NCBI)	no	0.17
14	b2071	yegJ	hypothetical protein (NCBI)	no	0.17
15	b3961	oxyR	DNA-binding transcriptional dual regulator (NCBI)	no	0.17
16	b0539	ybcC	DLP12 prophage; predicted exonuclease (RefSeq)	no	0.17
17	b3612	gpmI	phosphoglyceromutase (NCBI)	0.66	0.17
18	b0123	cueO	multicopper oxidase (laccase) (NCBI)	0.30	0.17
19	b2098	yegT	predicted nucleoside transporter (NCBI)	no	0.17
20	b2158	yeiH	conserved inner membrane protein (NCBI)	no	0.16

Or look for negative cofitness