Top cofit genes for b3039 from Escherichia coli BW25113

ygiD: predicted dioxygenase (RefSeq)
SEED: Uncharacterized protein ygiD

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b4183	yjfK	hypothetical protein (NCBI)	0.62	0.29
2	b2155	cirA	ferric iron-catecholate outer membrane transporter (NCBI)	no	0.25
3	b1634	tppB	putative tripeptide transporter permease (NCBI)	no	0.20
4	b4083	yjcS	orf, hypothetical protein (VIMSS)	0.22	0.20
5	b2844	yqeF	putative acyltransferase (VIMSS)	0.57	0.18
6	b3424	glpG	predicted intramembrane serine protease (NCBI)	0.20	0.18
7	b3094	exuR	negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS)	no	0.18
8	b4511	ybdZ	hypothetical protein (NCBI)	no	0.18
9	b2295	yfbV	hypothetical protein (NCBI)	no	0.18
10	b3932	hslV	ATP-dependent protease peptidase subunit (NCBI)	0.75	0.18
11	b2154	yeiG	predicted esterase (NCBI)	0.37	0.18
12	b3931	hslU	ATP-dependent protease ATP-binding subunit (NCBI)	0.43	0.17
13	b0441	ppiD	peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI)	0.33	0.17
14	b2845	yqeG	predicted transporter (NCBI)	0.42	0.17
15	b2869	ygeV	predicted DNA-binding transcriptional regulator (NCBI)	0.19	0.17
16	b2156	lysP	lysine transporter (NCBI)	no	0.17
17	b3038	ygiC	predicted enzyme (NCBI)	0.45	0.16
18	b2669	stpA	DNA binding protein, nucleoid-associated (NCBI)	no	0.16
19	b3891	fdhE	formate dehydrogenase accessory protein FdhE (NCBI)	no	0.16
20	b3143	yraI	predicted periplasmic pilin chaperone (NCBI)	no	0.16

Or look for negative cofitness