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  • Top cofit genes for b3029 from Escherichia coli BW25113

    ygiN: quinol monooxygenase (NCBI)
    SEED: FIG00896075: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 b4695 ykgT no description no 0.26
    2 b0238 gpt xanthine phosphoribosyltransferase (NCBI) no 0.23
    3 b1147 ymfL e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) no 0.21
    4 b2814 metZ tRNA-Met (NCBI) no 0.19
    5 b4630 ykgP no description no 0.18
    6 b0782 moaB molybdopterin biosynthesis protein B (NCBI) no 0.18
    7 b1465 narV nitrate reductase 2 (NRZ), gamma subunit (NCBI) no 0.18
    8 b2561 yfhH orf, hypothetical protein (VIMSS) no 0.17
    9 b1306 pspC DNA-binding transcriptional activator (NCBI) 0.55 0.17
    10 b0906 ycaP conserved inner membrane protein (NCBI) no 0.17
    11 b2363 yfdT CPS-53 (KpLE1) prophage; predicted protein (NCBI) no 0.17
    12 b1057 yceJ predicted cytochrome b561 (NCBI) no 0.16
    13 b3896 yiiG hypothetical protein (NCBI) no 0.16
    14 b3998 nfi endonuclease V (deoxyinosine 3'endoduclease) (VIMSS) no 0.16
    15 b1399 paaX DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive (NCBI) no 0.16
    16 b3657 yicJ putative permease (VIMSS) no 0.16
    17 b4064 yjcD predicted permease (NCBI) no 0.15
    18 b2385 ypdF predicted peptidase (NCBI) no 0.15
    19 b3406 greB transcription elongation factor GreB (NCBI) 0.53 0.15
    20 b2331 yfcN hypothetical protein (NCBI) 0.32 0.15

    Or look for negative cofitness