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Cofit
Top cofit genes for b2915 from
Escherichia coli BW25113
yqfE
:
hypothetical protein (RefSeq)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b2291
yfbR
hypothetical protein (NCBI)
no
0.24
2
b1127
pepT
peptidase T (NCBI)
no
0.22
3
b1565
ydfV
Qin prophage; predicted protein (NCBI)
no
0.22
4
b3691
dgoT
D-galactonate transport (VIMSS)
no
0.22
5
b1296
ycjJ
putative amino acid/amine transport protein (VIMSS)
no
0.21
6
b2134
pbpG
penicillin-binding protein 7 (VIMSS)
no
0.21
7
b1410
ynbC
predicted hydrolase (NCBI)
no
0.20
8
b1511
ydeV
putative kinase (VIMSS)
no
0.20
9
b4355
tsr
methyl-accepting chemotaxis protein I, serine sensor receptor (NCBI)
no
0.19
10
b0334
prpD
2-methylcitrate dehydratase (NCBI)
no
0.19
11
b4376
osmY
periplasmic protein (NCBI)
no
0.19
12
b2871
ygeX
diaminopropionate ammonia-lyase (NCBI)
no
0.19
13
b4385
yjjJ
predicted DNA-binding transcriptional regulator (NCBI)
no
0.19
14
b1650
nemA
N-ethylmaleimide reductase, FMN-linked (NCBI)
no
0.19
15
b1711
btuC
vtamin B12-transporter permease (NCBI)
no
0.19
16
b0940
ycbS
predicted outer membrane usher protein (NCBI)
no
0.19
17
b3638
radC
DNA repair protein (VIMSS)
no
0.19
18
b1414
ydcF
hypothetical protein (NCBI)
no
0.18
19
b0366
tauB
taurine transporter subunit (NCBI)
no
0.18
20
b0822
ybiV
predicted hydrolase (NCBI)
no
0.18
Or look for
negative cofitness