Top cofit genes for b2888 from Escherichia coli BW25113

ygfU: putative permease (VIMSS)
SEED: Xanthine permease

Rank Hit Name Description Conserved? Cofitness  
1 b3143 yraI predicted periplasmic pilin chaperone (NCBI) 0.41 0.37
2 b2761 ygcB conserved protein, member of DEAD box family (NCBI) no 0.37
3 b2270 yfbK hypothetical protein (NCBI) 0.15 0.34
4 b2647 ypjA putative ATP-binding component of a transport system (VIMSS) no 0.33
5 b2368 emrK EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component (NCBI) no 0.32
6 b4342 yjiT orf, hypothetical protein (VIMSS) no 0.32
7 b0304 ykgC putative oxidoreductase (VIMSS) no 0.31
8 b4310 yjhT orf, hypothetical protein (VIMSS) no 0.30
9 b0901 ycaK hypothetical protein (NCBI) no 0.30
10 b0139 htrE predicted outer membrane usher protein (NCBI) 0.83 0.30
11 b0703 ybfO conserved protein, rhs-like (RefSeq) no 0.30
12 b0562 ybcY orf, hypothetical protein (VIMSS) no 0.30
13 b1024 ycdS predicted outer membrane protein (NCBI) no 0.30
14 b1799 yeaT putative transcriptional regulator LYSR-type (VIMSS) 0.32 0.29
15 b2863 ygeQ orf, hypothetical protein (VIMSS) no 0.29
16 b3874 yihN predicted transporter (NCBI) no 0.29
17 b3680 yidL predicted DNA-binding transcriptional regulator (RefSeq) no 0.29
18 b3508 yhiD predicted Mg(2+) transport ATPase inner membrane protein (NCBI) no 0.28
19 b3720 bglH carbohydrate-specific outer membrane porin, cryptic (NCBI) 0.80 0.28
20 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) 0.30 0.28

Or look for negative cofitness