Top cofit genes for b2775 from Escherichia coli BW25113

yqcE: predicted transporter (NCBI)
SEED: Inner membrane protein YqcE

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b4308	yjhR	KpLE2 phage-like element; predicted frameshift suppressor (NCBI)	no	0.43
2	b4271	intB	KpLE2 phage-like element; predicted integrase (RefSeq)	no	0.36
3	b3323	gspA	general secretory pathway component, cryptic (NCBI)	no	0.34
4	b3508	yhiD	predicted Mg(2+) transport ATPase inner membrane protein (NCBI)	no	0.34
5	b3143	yraI	predicted periplasmic pilin chaperone (NCBI)	no	0.34
6	b0691	ybfG	orf, hypothetical protein (VIMSS)	no	0.33
7	b2845	yqeG	predicted transporter (NCBI)	0.33	0.32
8	b2270	yfbK	hypothetical protein (NCBI)	no	0.32
9	b2260	menE	O-succinylbenzoic acid--CoA ligase (NCBI)	no	0.31
10	b2761	ygcB	conserved protein, member of DEAD box family (NCBI)	no	0.30
11	b0139	htrE	predicted outer membrane usher protein (NCBI)	0.75	0.30
12	b2032	wbbK	lipopolysaccharide biosynthesis protein (NCBI)	no	0.30
13	b0315	yahA	predicted DNA-binding transcriptional regulator (NCBI)	no	0.29
14	b3360	pabA	para-aminobenzoate synthase component II (NCBI)	no	0.29
15	b4411	ecnB	entericidin B membrane lipoprotein (NCBI)	no	0.29
16	b0703	ybfO	conserved protein, rhs-like (RefSeq)	no	0.29
17	b2160	yeiI	predicted kinase (NCBI)	no	0.29
18	b4342	yjiT	orf, hypothetical protein (VIMSS)	no	0.29
19	b0646	djlB	predicted chaperone (NCBI)	0.48	0.29
20	b2647	ypjA	putative ATP-binding component of a transport system (VIMSS)	no	0.29

Or look for negative cofitness