Top cofit genes for b2749 from Escherichia coli BW25113

ygbE: conserved inner membrane protein (NCBI)
SEED: Putative cytochrome oxidase subunit

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b0122	yacC	orf, hypothetical protein (VIMSS)	0.63	0.45
2	b3515	gadW	DNA-binding transcriptional activator (NCBI)	no	0.40
3	b2218	rcsC	hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq)	0.77	0.37
4	b1049	mdoH	glucosyltransferase MdoH (NCBI)	0.73	0.36
5	b0965	b0965	orf, hypothetical protein (VIMSS)	0.44	0.36
6	b2216	rcsD	phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI)	0.51	0.35
7	b1048	mdoG	glucan biosynthesis protein, periplasmic (NCBI)	0.70	0.35
8	b3934	cytR	DNA-binding transcriptional dual regulator (NCBI)	0.34	0.33
9	b0191	yaeJ	hypothetical protein (NCBI)	no	0.33
10	b0929	ompF	outer membrane porin 1a (Ia;b;F) (NCBI)	0.67	0.32
11	b2821	ptr	protease III (NCBI)	0.47	0.31
12	b3751	rbsB	D-ribose transporter subunit (NCBI)	no	0.31
13	b0840	deoR	DNA-binding transcriptional repressor (NCBI)	no	0.31
14	b3009	yghB	conserved inner membrane protein (NCBI)	0.49	0.30
15	b1424	mdoD	glucan biosynthesis protein, periplasmic (RefSeq)	0.75	0.28
16	b2847	yqeI	predicted transcriptional regulator (NCBI)	no	0.28
17	b3347	fkpA	FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI)	0.60	0.28
18	b4484	cpxP	periplasmic protein combats stress (NCBI)	0.45	0.28
19	b3169	nusA	transcription elongation factor NusA (NCBI)	no	0.27
20	b3741	gidA	glucose-inhibited division protein A (NCBI)	no	0.26

Or look for negative cofitness