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Cofit
Protein
Homologs
Top cofit genes for b2744 from
Escherichia coli BW25113
surE
:
acid phosphatase (NCBI)
KEGG: 5'-nucleotidase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b1865
nudB
dATP pyrophosphohydrolase (NCBI)
0.22
0.34
2
b4019
metH
B12-dependent methionine synthase (NCBI)
0.67
0.30
3
b2745
truD
tRNA pseudouridine synthase D (NCBI)
0.94
0.29
4
b1856
yebA
orf, hypothetical protein (VIMSS)
0.79
0.29
5
b3388
damX
hypothetical protein (NCBI)
0.61
0.26
6
b3055
htrG
predicted signal transduction protein (SH3 domain) (NCBI)
no
0.26
7
b3527
yhjJ
predicted zinc-dependent peptidase (NCBI)
no
0.26
8
b1238
tdk
thymidine kinase (NCBI)
0.29
0.26
9
b3928
yiiU
hypothetical protein (NCBI)
no
0.26
10
b0633
rlpA
minor lipoprotein (NCBI)
0.25
0.25
11
b0742
ybgF
hypothetical protein (NCBI)
0.59
0.24
12
b2175
spr
predicted peptidase, outer membrane lipoprotein (NCBI)
0.70
0.23
13
b3966
btuB
vitamin B12/cobalamin outer membrane transporter (NCBI)
0.83
0.23
14
b4472
yhdP
conserved membrane protein, predicted transporter (NCBI)
0.70
0.22
15
b3387
dam
DNA adenine methylase (NCBI)
no
0.22
16
b0460
hha
modulator of gene expression, with H-NS (NCBI)
no
0.21
17
b2393
nupC
nucleoside (except guanosine) transporter (NCBI)
no
0.21
18
b2912
ygfA
putative ligase (VIMSS)
0.47
0.21
19
b0926
ycbK
hypothetical protein (NCBI)
no
0.21
20
b2910
zapA
protein that localizes to the cytokinetic ring (NCBI)
no
0.21
Or look for
negative cofitness