Top cofit genes for b2741 from Escherichia coli BW25113

rpoS: RNA polymerase sigma factor (NCBI)
SEED: RNA polymerase sigma factor RpoS
KEGG: RNA polymerase nonessential primary-like sigma factor

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b0240	crl	DNA-binding transcriptional regulator (NCBI)	0.80	0.80
2	b4071	nrfB	formate-dependent nitrite reductase; a penta-haeme cytochrome c (VIMSS)	no	0.80
3	b2944	sprT	hypothetical protein (NCBI)	no	0.72
4	b0382	yaiB	hypothetical protein (NCBI)	no	0.71
5	b1725	yniA	predicted phosphotransferase/kinase (NCBI)	0.54	0.69
6	b0503	ybbB	tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI)	no	0.67
7	b3753	rbsR	DNA-binding transcriptional repressor of ribose metabolism (NCBI)	0.83	0.65
8	b2229	b2229	orf, hypothetical protein (VIMSS)	no	0.64
9	b1743	spy	envelope stress induced periplasmic protein (NCBI)	no	0.62
10	b2004	yeeU	CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI)	no	0.60
11	b2643	yfjX	CP4-57 prophage; predicted antirestriction protein (NCBI)	no	0.60
12	b4097	phnK	carbon-phosphorus lyase complex subunit (NCBI)	no	0.59
13	b1422	ydcI	putative transcriptional regulator LYSR-type (VIMSS)	0.60	0.58
14	b3752	rbsK	ribokinase (NCBI)	0.78	0.58
15	b1822	rrmA	23S rRNA m1G745 methyltransferase (NCBI)	0.38	0.57
16	b1823	cspC	stress protein, member of the CspA-family (NCBI)	0.71	0.57
17	b3929	rraA	ribonuclease activity regulator protein RraA (NCBI)	no	0.56
18	b3877	yihP	predicted transporter (RefSeq)	no	0.56
19	b1824	yobF	hypothetical protein (NCBI)	0.79	0.55
20	b3106	yhaK	predicted pirin-related protein (NCBI)	0.54	0.55

Or look for negative cofitness