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  • Top cofit genes for b2734 from Escherichia coli BW25113

    pphB: serine/threonine-specific protein phosphatase 2 (NCBI)
    SEED: Serine/threonine protein phosphatase 2 (EC 3.1.3.16)
    KEGG: serine/threonine protein phosphatase 2

    Rank Hit Name Description Conserved? Cofitness  
    1 b0833 yliE conserved inner membrane protein (NCBI) no 0.39
    2 b2367 emrY predicted multidrug efflux system (NCBI) no 0.38
    3 b1409 ynbB predicted CDP-diglyceride synthase (NCBI) 0.28 0.37
    4 b1309 ycjM putative polysaccharide hydrolase (VIMSS) no 0.37
    5 b0500 ybbD hypothetical protein (RefSeq) no 0.37
    6 b0279 yagM CP4-6 prophage; predicted protein (NCBI) no 0.37
    7 b2847 yqeI predicted transcriptional regulator (NCBI) no 0.36
    8 b0603 ybdO predicted DNA-binding transcriptional regulator (NCBI) no 0.36
    9 b1407 ydbD orf, hypothetical protein (VIMSS) no 0.35
    10 b0136 yadK predicted fimbrial-like adhesin protein (NCBI) no 0.35
    11 b1690 ydiM predicted transporter (NCBI) 0.62 0.35
    12 b0137 yadL predicted fimbrial-like adhesin protein (NCBI) no 0.34
    13 b4346 mcrB component of McrBC 5-methylcytosine restriction system (VIMSS) 0.71 0.34
    14 b4497 yeeL no description no 0.34
    15 b1497 b1497 putative enzyme (VIMSS) no 0.34
    16 b4462 ygaQ hypothetical protein (RefSeq) no 0.34
    17 b1167 ymgC hypothetical protein (NCBI) no 0.34
    18 b3622 rfaL O-antigen ligase (NCBI) no 0.33
    19 b0787 ybhM conserved inner membrane protein (NCBI) no 0.33
    20 b4279 yjhB putative transport protein (VIMSS) no 0.33

    Or look for negative cofitness