Top cofit genes for b2700 from Escherichia coli BW25113

ygaD: competence damage-inducible protein A (NCBI)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2320	pdxB	erythronate-4-phosphate dehydrogenase (NCBI)	no	0.24
2	b3993	thiE	thiamine-phosphate pyrophosphorylase (NCBI)	0.45	0.24
3	b0052	pdxA	4-hydroxythreonine-4-phosphate dehydrogenase (NCBI)	0.76	0.24
4	b2103	thiD	phosphomethylpyrimidine kinase (NCBI)	0.52	0.24
5	b3994	thiC	thiamine biosynthesis protein ThiC (NCBI)	0.76	0.23
6	b0810	glnP	glutamine ABC transporter permease protein (NCBI)	0.31	0.23
7	b3829	metE	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (NCBI)	0.49	0.22
8	b1360	ydaV	Rac prophage; predicted DNA replication protein (NCBI)	no	0.22
9	b3991	thiG	thiamin biosynthesis, thiazole moiety (VIMSS)	0.51	0.22
10	b0238	gpt	xanthine phosphoribosyltransferase (NCBI)	0.33	0.22
11	b4088	alsB	D-allose transporter subunit (NCBI)	0.34	0.22
12	b3992	thiF	thiamin biosynthesis, thiazole moiety (VIMSS)	no	0.21
13	b3828	metR	DNA-binding transcriptional activator, homocysteine-binding (NCBI)	0.61	0.21
14	b4231	yjfF	putative transport system permease protein (VIMSS)	no	0.20
15	b2564	pdxJ	pyridoxal phosphate biosynthetic protein (NCBI)	no	0.19
16	b0423	thiI	thiamine biosynthesis protein ThiI (NCBI)	0.83	0.19
17	b3650	spoT	bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI)	0.91	0.19
18	b2586	yfiM	predicted protein (RefSeq)	no	0.19
19	b3990	thiH	thiamine biosynthesis protein ThiH (NCBI)	0.52	0.19
20	b0390	aroM	hypothetical protein (NCBI)	no	0.18

Or look for negative cofitness