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  • Top cofit genes for b2544 from Escherichia coli BW25113

    yphB: hypothetical protein (NCBI)
    SEED: Aldose 1-epimerase family protein YphB

    Rank Hit Name Description Conserved? Cofitness  
    1 b0878 b0878 putative membrane protein (VIMSS) 0.85 0.21
    2 b4438 cyaR sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) no 0.20
    3 b2122 yehQ orf, hypothetical protein (VIMSS) no 0.20
    4 b3898 frvX predicted endo-1,4-beta-glucanase (NCBI) no 0.20
    5 b1586 b1586 orf, hypothetical protein (VIMSS) no 0.20
    6 b2946 yggJ orf, hypothetical protein (VIMSS) 0.29 0.19
    7 b1698 ydiR predicted electron transfer flavoprotein, FAD-binding (NCBI) no 0.17
    8 b2073 yegL hypothetical protein (NCBI) no 0.17
    9 b4336 yjiN conserved inner membrane protein (NCBI) no 0.17
    10 b2523 pepB putative peptidase (VIMSS) no 0.16
    11 b3999 yjaG hypothetical protein (NCBI) no 0.16
    12 b2534 yfhR predicted peptidase (RefSeq) 0.33 0.16
    13 b0937 ssuE NAD(P)H-dependent FMN reductase (NCBI) 0.45 0.16
    14 b2520 yfhM hypothetical protein (NCBI) no 0.16
    15 b0735 ybgE conserved inner membrane protein (NCBI) 0.15 0.16
    16 b0442 ybaV hypothetical protein (NCBI) no 0.16
    17 b0850 ybjC predicted inner membrane protein (NCBI) 0.33 0.16
    18 b2901 bglA 6-phospho-beta-glucosidase A (NCBI) no 0.16
    19 b2906 visC hypothetical protein (NCBI) no 0.16
    20 b2093 gatB galactitol-specific enzyme IIB component of PTS (NCBI) no 0.15

    Or look for negative cofitness