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Cofit
Protein
Homologs
Top cofit genes for b2506 from
Escherichia coli BW25113
yfgI
:
hypothetical protein (NCBI)
SEED: Putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
b4045
yjbJ
predicted stress response protein (NCBI)
no
0.28
2
b0533
sfmH
predicted fimbrial-like adhesin protein (RefSeq)
no
0.23
3
b4299
yjhI
KpLE2 phage-like element; predicted DNA-binding transcriptional regulator (NCBI)
no
0.23
4
b0239
frsA
fermentation/respiration switch protein (NCBI)
no
0.23
5
b2877
ygfJ
hypothetical protein (NCBI)
no
0.22
6
b4310
yjhT
orf, hypothetical protein (VIMSS)
no
0.20
7
b2761
ygcB
conserved protein, member of DEAD box family (NCBI)
no
0.20
8
b4181
yjfI
hypothetical protein (NCBI)
no
0.20
9
b2369
evgA
DNA-binding response regulator in two-component regulatory system with EvgS (NCBI)
no
0.20
10
b1882
cheY
chemotaxis regulator transmitting signal to flagellar motor component (NCBI)
no
0.20
11
b2626
yfjJ
CP4-57 prophage; predicted protein (NCBI)
no
0.19
12
b3094
exuR
negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS)
no
0.19
13
b2373
oxc
hypothetical protein (NCBI)
no
0.19
14
b2623
yfjH
CP4-57 prophage; predicted protein (NCBI)
no
0.19
15
b2086
yegS
hypothetical protein (NCBI)
no
0.19
16
b2874
yqeA
predicted amino acid kinase (NCBI)
no
0.19
17
b0939
ycbR
predicted periplasmic pilin chaperone (NCBI)
no
0.19
18
b1842
holE
DNA polymerase III, theta subunit (NCBI)
no
0.18
19
b1967
hchA
chaperone protein HchA (NCBI)
0.39
0.18
20
b0645
ybeR
hypothetical protein (NCBI)
no
0.18
Or look for
negative cofitness