• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for b2263 from Escherichia coli BW25113

    yfbB: predicted peptidase (NCBI)
    SEED: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
    KEGG: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 b4093 phnO predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) no 0.27
    2 b0296 ykgM 50S ribosomal protein L31 (NCBI) no 0.25
    3 b0866 ybjQ hypothetical protein (NCBI) no 0.23
    4 b4568 ytjA predicted protein (RefSeq) 0.31 0.23
    5 b2248 yfaX predicted DNA-binding transcriptional regulator (NCBI) 0.51 0.22
    6 b4301 sgcE ribulose-phosphate 3-epimerase (NCBI) no 0.21
    7 b1585 ynfC orf, hypothetical protein (VIMSS) no 0.21
    8 b1104 ycfL hypothetical protein (NCBI) no 0.20
    9 b0218 yafU predicted inner membrane protein (RefSeq) no 0.20
    10 b0550 rusA DLP12 prophage; endonuclease RUS (NCBI) no 0.20
    11 b2809 b2809 orf, hypothetical protein (VIMSS) no 0.20
    12 b2264 menD 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) 0.85 0.19
    13 b2602 yfiL orf, hypothetical protein (VIMSS) no 0.19
    14 b4575 yjgX no description no 0.18
    15 b4349 hsdM DNA methylase M (NCBI) no 0.18
    16 b0036 caiD crotonobetainyl CoA hydratase (RefSeq) no 0.18
    17 b0593 entC isochorismate synthase (NCBI) 0.40 0.18
    18 b1809 b1809 orf, hypothetical protein (VIMSS) no 0.18
    19 b2958 yggN hypothetical protein (NCBI) no 0.17
    20 b1797 yeaR hypothetical protein (NCBI) no 0.17

    Or look for negative cofitness