Top cofit genes for b2225 from Escherichia coli BW25113

yfaP: hypothetical protein (NCBI)
SEED: FIG00638718: hypothetical protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b3998	nfi	endonuclease V (deoxyinosine 3'endoduclease) (VIMSS)	no	0.25
2	b2464	talA	transaldolase A (NCBI)	0.30	0.24
3	b0453	ybaY	glycoprotein/polysaccharide metabolism (VIMSS)	no	0.23
4	b4097	phnK	carbon-phosphorus lyase complex subunit (NCBI)	no	0.23
5	b2806	ygdE	predicted methyltransferase (NCBI)	0.17	0.22
6	b2868	xdhC	xanthine dehydrogenase, Fe-S binding subunit (NCBI)	no	0.22
7	b2317	dedA	conserved inner membrane protein (NCBI)	0.37	0.22
8	b3691	dgoT	D-galactonate transport (VIMSS)	no	0.22
9	b2386	ypdG	predicted enzyme IIC component of PTS (NCBI)	no	0.22
10	b2385	ypdF	predicted peptidase (NCBI)	no	0.21
11	b1429	tehA	potassium-tellurite ethidium and proflavin transporter (NCBI)	no	0.21
12	b2000	flu	CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter (NCBI)	0.58	0.21
13	b0239	frsA	fermentation/respiration switch protein (NCBI)	no	0.21
14	b4464	ygfQ	predicted transporter (NCBI)	no	0.21
15	b3349	slyD	FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI)	no	0.21
16	b3824	rhtB	neutral amino-acid efflux system (NCBI)	no	0.20
17	b2997	hybO	hydrogenase 2, small subunit (NCBI)	0.27	0.20
18	b4694	yagP	no description	no	0.20
19	b3638	radC	DNA repair protein (VIMSS)	no	0.20
20	b4471	tdcG	L-serine dehydratase 3 (NCBI)	no	0.20

Or look for negative cofitness