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  • Top cofit genes for b2215 from Escherichia coli BW25113

    ompC: outer membrane porin protein C (NCBI)
    SEED: Outer membrane protein C precursor
    KEGG: outer membrane pore protein C

    Rank Hit Name Description Conserved? Cofitness  
    1 b3404 envZ osmolarity sensor protein (NCBI) 0.90 0.64
    2 b0436 tig trigger factor (NCBI) 0.81 0.59
    3 b3405 ompR osmolarity response regulator (NCBI) 0.90 0.53
    4 b3609 secB export protein SecB (NCBI) no 0.47
    5 b1111 ycfQ orf, hypothetical protein (VIMSS) 0.89 0.47
    6 b2512 yfgL protein assembly complex, lipoprotein component (NCBI) 0.92 0.45
    7 b0178 hlpA periplasmic chaperone (NCBI) 0.74 0.43
    8 b2572 rseA anti-sigma factor (NCBI) 0.78 0.42
    9 b2896 ygfX hypothetical protein (NCBI) 0.74 0.40
    10 b3150 yraP hypothetical protein (NCBI) no 0.39
    11 b2617 smpA small membrane protein A (VIMSS) 0.87 0.38
    12 b0688 pgm phosphoglucomutase (NCBI) no 0.38
    13 b3842 rfaH transcriptional activator RfaH (NCBI) 0.71 0.37
    14 b3096 yqjB hypothetical protein (NCBI) 0.74 0.37
    15 b3630 rfaP kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) no 0.37
    16 b2144 sanA hypothetical protein (NCBI) 0.73 0.37
    17 b1905 ftn ferritin iron storage protein (cytoplasmic) (NCBI) no 0.35
    18 b2494 yfgC predicted peptidase (NCBI) 0.29 0.34
    19 b3631 rfaG glucosyltransferase I (NCBI) no 0.33
    20 b3387 dam DNA adenine methylase (NCBI) no 0.33

    Or look for negative cofitness