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  • Top cofit genes for b2215 from Escherichia coli BW25113

    ompC: outer membrane porin protein C (NCBI)
    SEED: Outer membrane protein C precursor
    KEGG: outer membrane pore protein C

    Rank Hit Name Description Conserved? Cofitness  
    1 b3404 envZ osmolarity sensor protein (NCBI) 0.90 0.65
    2 b0436 tig trigger factor (NCBI) 0.81 0.58
    3 b3405 ompR osmolarity response regulator (NCBI) 0.90 0.50
    4 b1111 ycfQ orf, hypothetical protein (VIMSS) 0.89 0.46
    5 b3609 secB export protein SecB (NCBI) no 0.44
    6 b2512 yfgL protein assembly complex, lipoprotein component (NCBI) 0.92 0.41
    7 b0178 hlpA periplasmic chaperone (NCBI) 0.74 0.40
    8 b2572 rseA anti-sigma factor (NCBI) 0.78 0.38
    9 b2896 ygfX hypothetical protein (NCBI) 0.74 0.38
    10 b2617 smpA small membrane protein A (VIMSS) 0.87 0.37
    11 b3096 yqjB hypothetical protein (NCBI) 0.74 0.37
    12 b3150 yraP hypothetical protein (NCBI) no 0.36
    13 b0688 pgm phosphoglucomutase (NCBI) no 0.34
    14 b1905 ftn ferritin iron storage protein (cytoplasmic) (NCBI) no 0.34
    15 b3842 rfaH transcriptional activator RfaH (NCBI) 0.71 0.33
    16 b2144 sanA hypothetical protein (NCBI) 0.73 0.33
    17 b4221 ytfN hypothetical protein (NCBI) 0.68 0.33
    18 b3687 ibpA heat shock chaperone (NCBI) no 0.32
    19 b4289 fecC KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) no 0.32
    20 b3630 rfaP kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) no 0.32

    Or look for negative cofitness