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  • Top cofit genes for b2143 from Escherichia coli BW25113

    cdd: cytidine deaminase (NCBI)
    SEED: Cytidine deaminase (EC 3.5.4.5)
    KEGG: cytidine deaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 b0543 emrE multidrug efflux protein (NCBI) no 0.35
    2 b3934 cytR DNA-binding transcriptional dual regulator (NCBI) 0.36 0.28
    3 b4381 deoC deoxyribose-phosphate aldolase (NCBI) 0.35 0.26
    4 b1167 ymgC hypothetical protein (NCBI) no 0.26
    5 b0938 ycbQ putative fimbrial-like protein (VIMSS) no 0.25
    6 b3727 pstC phosphate transporter subunit (NCBI) 0.26 0.25
    7 b4017 arpA regulator of acetyl CoA synthetase (NCBI) no 0.23
    8 b4590 ybfK hypothetical protein (RefSeq) no 0.23
    9 b2847 yqeI predicted transcriptional regulator (NCBI) no 0.23
    10 b3483 yhhH orf, hypothetical protein (VIMSS) no 0.23
    11 b4253 yjgL orf, hypothetical protein (VIMSS) no 0.23
    12 b0500 ybbD hypothetical protein (RefSeq) no 0.22
    13 b3961 oxyR DNA-binding transcriptional dual regulator (NCBI) no 0.22
    14 b0603 ybdO predicted DNA-binding transcriptional regulator (NCBI) 0.38 0.22
    15 b3725 pstB phosphate transporter subunit (NCBI) no 0.22
    16 b2625 yfjI CP4-57 prophage; predicted protein (NCBI) no 0.22
    17 b3462 ftsX predicted transporter subunit: membrane component of ABC superfamily (NCBI) no 0.22
    18 b2371 yfdE putative enzyme (VIMSS) no 0.22
    19 b3795 yifK predicted transporter (NCBI) 0.28 0.21
    20 b2055 wcaE predicted glycosyl transferase (NCBI) no 0.21

    Or look for negative cofitness