Top cofit genes for b2082 from Escherichia coli BW25113

ogrK: DNA-binding transcriptional regulator prophage P2 remnant (NCBI)
SEED: putative positive regulator of late gene transcription

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b1225	narH	nitrate reductase 1, beta (Fe-S) subunit (NCBI)	no	0.33
2	b3828	metR	DNA-binding transcriptional activator, homocysteine-binding (NCBI)	no	0.33
3	b0251	yafY	CP4-6 prophage; predicted DNA-binding transcriptional regulator (RefSeq)	no	0.33
4	b0223	yafJ	predicted amidotransfease (NCBI)	0.71	0.32
5	b3993	thiE	thiamine-phosphate pyrophosphorylase (NCBI)	no	0.32
6	b0101	yacG	zinc-binding protein (NCBI)	no	0.32
7	b1426	ydcH	orf, hypothetical protein (VIMSS)	no	0.31
8	b2320	pdxB	erythronate-4-phosphate dehydrogenase (NCBI)	0.50	0.31
9	b0052	pdxA	4-hydroxythreonine-4-phosphate dehydrogenase (NCBI)	no	0.31
10	b3829	metE	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase (NCBI)	no	0.31
11	b2424	cysU	sulfate/thiosulfate transporter subunit (NCBI)	no	0.31
12	b4697	yrdF	no description	no	0.31
13	b3991	thiG	thiamin biosynthesis, thiazole moiety (VIMSS)	no	0.31
14	b3849	trkH	potassium transporter (NCBI)	0.43	0.29
15	b3994	thiC	thiamine biosynthesis protein ThiC (NCBI)	0.40	0.29
16	b1635	gst	glutathionine S-transferase (NCBI)	no	0.29
17	b3204	ptsN	sugar-specific enzyme IIA component of PTS (NCBI)	no	0.29
18	b2422	cysA	sulfate/thiosulfate transporter subunit (NCBI)	no	0.29
19	b1869	yecN	orf, hypothetical protein (VIMSS)	no	0.29
20	b0033	carB	carbamoyl-phosphate synthase large subunit (NCBI)	no	0.29

Or look for negative cofitness