Top cofit genes for b2038 from Escherichia coli BW25113

rfbC: dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI)
SEED: dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13)
KEGG: dTDP-4-dehydrorhamnose 3,5-epimerase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	b2040	rfbD	dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI)	0.98	0.94
2	b3628	rfaB	UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq)	no	0.54
3	b3627	rfaI	UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI)	no	0.48
4	b3629	rfaS	lipopolysaccharide core biosynthesis protein (NCBI)	no	0.47
5	b3626	rfaJ	UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI)	0.87	0.43
6	b3842	rfaH	transcriptional activator RfaH (NCBI)	0.58	0.38
7	b0565	ompT	DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) (NCBI)	no	0.32
8	b0178	hlpA	periplasmic chaperone (NCBI)	no	0.32
9	b3955	yijP	conserved inner membrane protein (NCBI)	no	0.31
10	b3630	rfaP	kinase that phosphorylates core heptose of lipopolysaccharide (NCBI)	no	0.31
11	b3623	rfaK	lipopolysaccharide core biosynthesis (NCBI)	no	0.30
12	b2572	rseA	anti-sigma factor (NCBI)	0.40	0.28
13	b3784	rfe	UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI)	0.83	0.27
14	b2617	smpA	small membrane protein A (VIMSS)	no	0.26
15	b2917	yliK	methylmalonyl-CoA mutase (NCBI)	0.74	0.26
16	b2620	smpB	SsrA-binding protein (NCBI)	0.65	0.25
17	b3778	rep	DNA helicase and single-stranded DNA-dependent ATPase (NCBI)	no	0.25
18	b2512	yfgL	protein assembly complex, lipoprotein component (NCBI)	no	0.25
19	b0436	tig	trigger factor (NCBI)	0.32	0.24
20	b1236	galU	glucose-1-phosphate uridylyltransferase (NCBI)	0.87	0.24

Or look for negative cofitness